Package: CausCor 0.1.3

Tomomi Sugiyama

CausCor: Calculate Correlations and Estimate Causality

This tool performs pairwise correlation analysis and estimate causality. Particularly, it is useful for detecting the metabolites that would be altered by the gut bacteria.

Authors:Tomomi Sugiyama [aut, cre]

CausCor_0.1.3.tar.gz
CausCor_0.1.3.zip(r-4.5)CausCor_0.1.3.zip(r-4.4)CausCor_0.1.3.zip(r-4.3)
CausCor_0.1.3.tgz(r-4.4-any)CausCor_0.1.3.tgz(r-4.3-any)
CausCor_0.1.3.tar.gz(r-4.5-noble)CausCor_0.1.3.tar.gz(r-4.4-noble)
CausCor_0.1.3.tgz(r-4.4-emscripten)CausCor_0.1.3.tgz(r-4.3-emscripten)
CausCor.pdf |CausCor.html✨
CausCor/json (API)
NEWS

# Install 'CausCor' in R:

install.packages('CausCor', repos = c('https://sugym.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/sugym/causcor/issues

On CRAN:

5 exports 1 stars 0.74 score 33 dependencies 1 scripts 295 downloads

Last updated 10 months agofrom:2c99f3481e. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 06 2024
R-4.5-win	OK	Sep 06 2024
R-4.5-linux	OK	Sep 06 2024
R-4.4-win	OK	Sep 06 2024
R-4.4-mac	OK	Sep 06 2024
R-4.3-win	OK	Sep 06 2024
R-4.3-mac	OK	Sep 06 2024

Exports:filter_40 filter_cc filter_n plot_16 save_text

Dependencies:cli colorspace cowplot dplyr fansi farver generics ggplot2 glue gtable isoband labeling lattice lifecycle magrittr MASS Matrix mgcv munsell nlme pillar pkgconfig R6 RColorBrewer rlang scales tibble tidyselect utf8 vctrs viridisLite withr WriteXLS

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Make list of A-B pair causal correlations - 40% Filtering version	filter_40
Make list of A-B pair causal correlations	filter_cc
Make list of A-B pair causal correlations - Normal Filtering version	filter_n
Save scatter plots	plot_16
Save list as a text file	save_text